For a cultivable organism, the highly diversified 5S rRNA genes can be correctively traced to a single species when pure culture is available for verification. However, cultivation-independent techniques Ipilimumab ic50 have become a standard in studies of complex microbiomes that contain mixed species, such as the Human Microbiome Project. In this type of study, highly diversified 5S rRNA genes from the same genome would be misinterpreted as being from different species, leading to over-estimation of species richness. This research was supported by grants

from the National Cancer Institute, the National Institute for Allergy and Infectious Diseases, and the National Institute of Dental and Craniofacial Research (UH3CA140233,

R01AI063477, R01CA159036, R03CA159414, and U19DE018385). A.V.A. was supported in part by grant 1UL1RR029893 from the National Center for Research Resources, National Institutes of Health. None of authors have a conflict of interest to declare. “
“The word ‘metagenomic’ is one of the most used words in environmental microbiology especially in recent years, yet sometimes it is a little overused. Can studies targeting a single gene be considered ‘metagenomic’? It is more controversial than once thought, maybe a possible solution may come from an etymological analysis of the word. “
“Morganella morganii has been identified as a causative agent of opportunistic infections and histamine poisoning. Bacteriophage is a virus Trichostatin A O-methylated flavonoid and has recently been considered an alternative agent to antibiotics for the control of bacteria that have developed antibiotic resistance. In this study, a novel M. morganii bacteriophage isolated from river water was characterized. The isolated phage, termed FSP1, was purified by polyethylene glycol

precipitation followed by cesium chloride density-gradient centrifugation. FSP1 has infectivity against only M. morganii and was identified as a Myoviridae bacteriophage through morphological analysis with transmission electron microscopy. According to the one-step growth curve, the FSP1 latent period, eclipse period, and burst size were 30, 20 min, and 42 PFU infected cell−1, respectively. The genome size of FSP1 was estimated to be c. 45.6–49.4 kb by restriction endonuclease analyses. Moreover, challenge testing against M. morganii in vitro revealed that FSP1 had high lytic activity and that the viable cell count of M. morganii was reduced by 6.12 log CFU mL−1 after inoculation with FSP1 at a multiplicity of infection (MOI) = 10. These results suggested that FSP1 could be used as a biocontrol agent against M. morganii for treatment of infectious disease treatment or food decontamination. “
“Salmonella is a facultative intracellular bacterium found within a variety of phagocytic and nonphagocytic cells in vitro and in vivo.