It was hypothesized that sGCSs may be important signals for genome bias. In this study,

we investigated sGCSs for specific GC content-related genomic features, using 2-kb sliding windows with 1-kb steps along the various genomes. We found that most of the bacteria, such as Firmicutes, Proteobacteria, and Bacteroidetes, contain much fewer sGCSs in their genomes compared to archaea (Table 1). For further comparison, we counted the number of bacteria and Archaea with different numbers of sGCSs (i.e., 2, 4-8, and ≥ 10, Table 1). In the bacteria group, most genomes contain less than eight sGCSs and show a simplified switch model of compositional bias (e.g., Bacteroidetes (24/25, 96%) and FRAX597 chemical structure Firmicutes (188/188, 100%)) (Table 1). However, in ancient click here bacterial genomes, the number of sGCSs is seldom fewer than eight. Taxon Phylum # of chromosomes NCT-501 ic50 # of sGCSs Percentage of sGCSs # < = 8 Average GC+/- SD (%)* Average Length +/- SD (kb)$       2 4-8 > = 10       Archaea Crenarchaeota 23 0 5 18 21.74% 44.39 +/- 9.66 2188.85 +/- 506.62   Euryarchaeota 57 7 13 37 35.09% 46.31 +/- 12.66 2211.67 +/- 1034.73   Korarchaeota 1 0 0 1 0.00% 49.75 +/- 0.00 1590.76 +/- 0.00   Nanoarchaeota 1 0 1 0 100.00% 31.60 +/- 0.00 490.88 +/- 0.00   Thaumarchaeota 1 0 0 1 0.00% 33.90 +/- 0.00 1645.26 +/- 0.00 Bacteria Acidobacteria 3 0 0 3 0.00% 60.13 +/- 1.64 6581.12 +/- 3028.39   Actinobacteria 92 20 23 49 46.74% 65.08 +/- 7.01 4563.76 +/- 2248.12   Aquificae 7 0 1 6 14.29% 38.82 +/- 5.91 1680.59 +/- 161.52   Bacteroidetes 29 14 14 1 96.55% 41.95 +/- 11.91 3653.46 +/- 2340.45   Chlamydiae 15 14 1 0 100.00% 40.25 +/- 1.67 1209.16 +/- 343.03   Chlorobi 11 8 3 0 100.00% 50.64 +/- 4.40 2618.73 +/- 417.30   Chloroflexi 14 5 4 5 64.29% 55.78 +/- 7.93 3290.10 +/- 2063.61   Cyanobacteria 41 9 14 18 56.10% 44.76 +/- 10.19 3185.53 +/- 2028.34   Deferribacteres 2 2 0 0 100.00% 36.87 +/- 8.07 2728.23

+/- 698.40   Deinococcus-Thermus 7 3 3 1 85.71% 66.54 +/- 2.43 2170.02 +/- 900.69   Dictyoglomi 2 2 0 0 100.00% 34.66 +/- 0.02 1907.77 next +/- 73.84   Elusimicrobia 2 2 0 0 100.00% 38.13 +/- 2.96 1384.71 +/- 366.07   Fibrobacteres 1 1 0 0 100.00% 47.74 +/- 0.00 3842.64 +/- 0.00   Firmicutes 200 198 2 0 100.00% 38.54 +/- 6.93 3081.76 +/- 1184.70   Fusobacteria 4 2 2 0 100.00% 28.83 +/- 3.56 2680.38 +/- 1205.57   Gemmatimonadetes 1 0 1 0 100.00% 64.17 +/- 0.00 4636.96 +/- 0.00   Nitrospirae 1 0 0 1 0.00% 33.91 +/- 0.00 2003.80 +/- 0.00   Planctomycetes 2 1 1 0 100.00% 56.21 +/- 1.74 6670.89 +/- 671.31   Proteobacteria 586 369 155 62 89.42% 53.12 +/- 12.12 3516.36 +/- 1661.41   Spirochaetes 24 21 3 0 100.00% 35.65 +/- 7.38 1680.71 +/- 1445.58   Synergistetes 2 2 0 0 100.00% 54.16 +/- 12.43 1914.53 +/- 93.